Your first post - welcome!
I would like to know if the items on my list are alright.
I'm trying hard not to make your first response too negative or critical, but I am wondering if you have landed on the best "approach". Additionally, you have said nothing about your experience level.
To answer your question literally, I would say that, at a minimum, your crystal will not work straight away with your 6502. Originally, 1 MHz was "normal" and today, WDC makes a 14MHz version, but I have never heard of a 16MHz version. Additionally, that EPROM is not going to program itself, so it is not alright...without a programmer.
I took a look at that website for the project , but I did not go through it carefully. What stuck out is that he offers a kit of all parts for the project (less 5V PS and EPROM programmer). If you are really on a quest to learn, the price for that kit is the tuition.
If it does not suit your budget, there is SOOOOOOOO much on building your own 6502 board, that I can't help but wonder if a more modest and "slow but sure" approach would be much better.
For example, start here
https://wilsonminesco.com/6502primer/index.html
That's my two cents anyways.