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Hi L,Yes, providing that whatever is connected to them does not load the programming signals during programming.
Les.
Hi N,Yes it's fine, depending on exactly what you're doing with the pins - I often allocate a debugging serial port to them (an FTDI board connected to them doesn't affect the programming.).
Hi M,Isolate them from the main circuit with 10E resistor and you will be fine.
Hi,
Thanks for the comments, all noted.
I'll try direct connections, then remind me if I report problems please.
Thanks, C.